node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OB1180 | OB1183 | gene:10733419 | gene:10733422 | Signal peptidase I; CDS_ID OB1180; Belongs to the peptidase S26 family. | Hypothetical conserved protein; CDS_ID OB1183. | 0.538 |
OB1180 | addA | gene:10733419 | gene:10733421 | Signal peptidase I; CDS_ID OB1180; Belongs to the peptidase S26 family. | ATP-dependent deoxyribonuclease subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. | 0.621 |
OB1180 | addB | gene:10733419 | gene:10733420 | Signal peptidase I; CDS_ID OB1180; Belongs to the peptidase S26 family. | ATP-dependent deoxyribonuclease subunit B; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation; this subunit has 5' -> 3' nuclease activity. | 0.583 |
OB1183 | OB1180 | gene:10733422 | gene:10733419 | Hypothetical conserved protein; CDS_ID OB1183. | Signal peptidase I; CDS_ID OB1180; Belongs to the peptidase S26 family. | 0.538 |
OB1183 | OB1184 | gene:10733422 | gene:10733423 | Hypothetical conserved protein; CDS_ID OB1183. | Hypothetical conserved protein; CDS_ID OB1184. | 0.641 |
OB1183 | addA | gene:10733422 | gene:10733421 | Hypothetical conserved protein; CDS_ID OB1183. | ATP-dependent deoxyribonuclease subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. | 0.759 |
OB1183 | addB | gene:10733422 | gene:10733420 | Hypothetical conserved protein; CDS_ID OB1183. | ATP-dependent deoxyribonuclease subunit B; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation; this subunit has 5' -> 3' nuclease activity. | 0.759 |
OB1184 | OB1183 | gene:10733423 | gene:10733422 | Hypothetical conserved protein; CDS_ID OB1184. | Hypothetical conserved protein; CDS_ID OB1183. | 0.641 |
OB1184 | addA | gene:10733423 | gene:10733421 | Hypothetical conserved protein; CDS_ID OB1184. | ATP-dependent deoxyribonuclease subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. | 0.586 |
OB1184 | addB | gene:10733423 | gene:10733420 | Hypothetical conserved protein; CDS_ID OB1184. | ATP-dependent deoxyribonuclease subunit B; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation; this subunit has 5' -> 3' nuclease activity. | 0.572 |
OB1941 | addA | gene:10734187 | gene:10733421 | Hypothetical conserved protein; CDS_ID OB1941. | ATP-dependent deoxyribonuclease subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. | 0.695 |
OB1941 | addB | gene:10734187 | gene:10733420 | Hypothetical conserved protein; CDS_ID OB1941. | ATP-dependent deoxyribonuclease subunit B; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation; this subunit has 5' -> 3' nuclease activity. | 0.619 |
OB2012 | OB2250 | gene:10734258 | gene:10734498 | Conjugation transfer protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. | Exonuclease; CDS_ID OB2250. | 0.464 |
OB2012 | OB2251 | gene:10734258 | gene:10734499 | Conjugation transfer protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. | Exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.409 |
OB2012 | addA | gene:10734258 | gene:10733421 | Conjugation transfer protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. | ATP-dependent deoxyribonuclease subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. | 0.874 |
OB2012 | recA | gene:10734258 | gene:10733864 | Conjugation transfer protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. | Multifunctional protein involved in homologous recombination (recombinase); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.477 |
OB2012 | topB | gene:10734258 | gene:10734842 | Conjugation transfer protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] | 0.597 |
OB2250 | OB2012 | gene:10734498 | gene:10734258 | Exonuclease; CDS_ID OB2250. | Conjugation transfer protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. | 0.464 |
OB2250 | OB2251 | gene:10734498 | gene:10734499 | Exonuclease; CDS_ID OB2250. | Exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.998 |
OB2250 | addA | gene:10734498 | gene:10733421 | Exonuclease; CDS_ID OB2250. | ATP-dependent deoxyribonuclease subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily. | 0.597 |