STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppSUndecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (252 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; CDS_ID OB1591; Belongs to the CDS family.
  
  
 0.980
OB1877
Geranyltranstransferase; CDS_ID OB1877; Belongs to the FPP/GGPP synthase family.
 
 
 0.966
gerCC
Heptaprenyl diphosphate synthase component II (spore germination protein C3); CDS_ID OB1788; Belongs to the FPP/GGPP synthase family.
 
 
 0.958
OB1199
Bacitracin resistance protein (undecaprenol kinase); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
     
 0.927
gerCA
Heptaprenyl diphosphate synthase component I (spore germination protein C1); CDS_ID OB1790.
  
 
 0.910
OB1592
Hypothetical conserved protein; Is responsible for Site-2 cleavage of the RsiW anti-sigma factor. This results, after a third proteolytic step catalyzed by the ClpXP protease, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity).
 
  
 0.894
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
  
 0.889
smbA
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.840
OB0469
Hypothetical conserved protein; CDS_ID OB0469.
   
 
 0.829
OB2460
Phytoene synthase; CDS_ID OB2460.
   
 
 0.829
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.