STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gerCB2-heptaprenyl-1,4-naphthoquinone methyltransferase (spore germination protein C2) (EC 2.1.1.-); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (238 aa)    
Predicted Functional Partners:
OB2327
1,4-dihydroxy-2-naphthodate octaprenyltransferase (EC 2.5.1.-) (menaquinone biosynthesis); Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
 
  
 0.924
gerCC
Heptaprenyl diphosphate synthase component II (spore germination protein C3); CDS_ID OB1788; Belongs to the FPP/GGPP synthase family.
 
  
 0.918
gerCA
Heptaprenyl diphosphate synthase component I (spore germination protein C1); CDS_ID OB1790.
 
  
 0.915
wrbA
Trp repressor binding protein; CDS_ID OB3102; Belongs to the WrbA family.
     
  0.900
OB3182
NAD(P)H oxidoreductase; CDS_ID OB3182.
     
  0.900
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
 
 
 0.674
traP
Tryptophan operon RNA-binding attenuation protein; Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan (By similarity); Belongs to the MtrB family.
  
    0.536
OB1792
Non-specific DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
     
 0.430
dhbF
Monomodular nonribosomal peptide synthetase; CDS_ID OB0958.
     
 0.422
OB1781
Prephenate dehydrogenase; CDS_ID OB1781.
 
  
 0.407
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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