Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OB0446 | OB0447 | gene:10732649 | gene:10732650 | Oxidoreductase; CDS_ID OB0446. | Hypothetical conserved protein; CDS_ID OB0447. | 0.574 |
OB0446 | OB0448 | gene:10732649 | gene:10732651 | Oxidoreductase; CDS_ID OB0446. | Amino acid ABC transporter ATP-binding protein; CDS_ID OB0448; Belongs to the ABC transporter superfamily. | 0.505 |
OB0447 | OB0446 | gene:10732650 | gene:10732649 | Hypothetical conserved protein; CDS_ID OB0447. | Oxidoreductase; CDS_ID OB0446. | 0.574 |
OB0447 | OB0448 | gene:10732650 | gene:10732651 | Hypothetical conserved protein; CDS_ID OB0447. | Amino acid ABC transporter ATP-binding protein; CDS_ID OB0448; Belongs to the ABC transporter superfamily. | 0.923 |
OB0447 | OB0449 | gene:10732650 | gene:10732652 | Hypothetical conserved protein; CDS_ID OB0447. | ABC transporter ATP-binding protein (antibiotic resistance); CDS_ID OB0449. | 0.445 |
OB0448 | OB0446 | gene:10732651 | gene:10732649 | Amino acid ABC transporter ATP-binding protein; CDS_ID OB0448; Belongs to the ABC transporter superfamily. | Oxidoreductase; CDS_ID OB0446. | 0.505 |
OB0448 | OB0447 | gene:10732651 | gene:10732650 | Amino acid ABC transporter ATP-binding protein; CDS_ID OB0448; Belongs to the ABC transporter superfamily. | Hypothetical conserved protein; CDS_ID OB0447. | 0.923 |
OB0448 | OB0449 | gene:10732651 | gene:10732652 | Amino acid ABC transporter ATP-binding protein; CDS_ID OB0448; Belongs to the ABC transporter superfamily. | ABC transporter ATP-binding protein (antibiotic resistance); CDS_ID OB0449. | 0.431 |
OB0449 | OB0447 | gene:10732652 | gene:10732650 | ABC transporter ATP-binding protein (antibiotic resistance); CDS_ID OB0449. | Hypothetical conserved protein; CDS_ID OB0447. | 0.445 |
OB0449 | OB0448 | gene:10732652 | gene:10732651 | ABC transporter ATP-binding protein (antibiotic resistance); CDS_ID OB0449. | Amino acid ABC transporter ATP-binding protein; CDS_ID OB0448; Belongs to the ABC transporter superfamily. | 0.431 |