STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OB0528Hypothetical conserved protein; CDS_ID OB0528. (182 aa)    
Predicted Functional Partners:
birA
Biotin [acetyl-CoA carboxylase] ligase : transcriptional repressor of the biotin operon; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.729
OB2136
Hypothetical protein; CDS_ID OB2136.
 
  
 0.624
OB1073
Hypothetical conserved protein; CDS_ID OB1073.
  
  
 0.563
OB2135
ABC transporter ATP-binding protein; CDS_ID OB2135.
 
  
 0.509
OB0248
Hypothetical conserved protein; CDS_ID OB0248.
 
  
 0.507
OB1312
Hypothetical conserved protein; CDS_ID OB1312.
  
  
 0.451
OB3088
Flavodoxin; CDS_ID OB3088.
 
  
 0.435
OB0529
Hypothetical conserved protein; CDS_ID OB0529.
       0.434
OB1072
Hypothetical conserved protein; CDS_ID OB1072.
  
  
 0.433
OB0026
Hypothetical conserved protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.419
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.