STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OB2090Hypothetical conserved protein; CDS_ID OB2090. (320 aa)    
Predicted Functional Partners:
OB2089
ABC transporter permease; CDS_ID OB2089.
 
 0.990
OB3208
Hypothetical conserved protein; CDS_ID OB3208.
 
 0.969
OB2091
Hypothetical conserved protein; CDS_ID OB2091.
 
 
 0.962
OB3210
Hypothetical protein; CDS_ID OB3210.
 
 
 0.956
OB3209
Hypothetical conserved protein; CDS_ID OB3209.
  
  
 
0.905
OB3422
Sugar binding-protein dependent transporter system permease; CDS_ID OB3422.
 
 
 0.751
OB3424
Hypothetical conserved protein; CDS_ID OB3424.
 
  
 0.728
OB0776
Sugar ABC transporter permease; CDS_ID OB0776.
 
 
 0.704
OB2088
Hypothetical conserved protein; CDS_ID OB2088; Belongs to the glycosyl hydrolase 28 family.
 
     0.688
OB2087
Xylosidase : arabinofuranosidase; CDS_ID OB2087; Belongs to the glycosyl hydrolase 43 family.
 
     0.657
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.