STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OB2831Glycolate oxidase subunit; CDS_ID OB2831. (466 aa)    
Predicted Functional Partners:
OB2832
Glycolate oxidase iron-sulfur subunit; CDS_ID OB2832.
 
 0.998
OB2405
Malate synthase; CDS_ID OB2405.
  
 
 0.921
OB3262
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.919
OB2357
Glycerate dehydrogenase; CDS_ID OB2357; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.918
OB2848
2-ketogluconate reductase; CDS_ID OB2848; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.918
OB0435
Catalase; CDS_ID OB0435; Belongs to the catalase family.
   
 0.915
OB0633
Catalase; CDS_ID OB0633; Belongs to the catalase family.
   
 0.915
katB
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.915
OB2782
Catalase; CDS_ID OB2782.
   
 0.915
OB1713
Phosphoglycolate phosphatase; CDS_ID OB1713.
    
 0.909
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.