STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OB3181Transcriptional regulator (LysR family); CDS_ID OB3181; Belongs to the LysR transcriptional regulatory family. (287 aa)    
Predicted Functional Partners:
OB3182
NAD(P)H oxidoreductase; CDS_ID OB3182.
 
  
 0.720
OB3180
Macrolide 2'-phosphotransferase; CDS_ID OB3180.
       0.682
OB3179
Hypothetical conserved protein; CDS_ID OB3179.
     
 0.539
OB3099
Glutamate synthase [NADPH] large subunit; CDS_ID OB3099.
  
  
 0.503
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.