STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OB3474ABC transporter substrate-binding protein; CDS_ID OB3474. (438 aa)    
Predicted Functional Partners:
OB3473
ABC transporter permease; CDS_ID OB3473.
 
 0.952
OB3472
ABC transporter permease; CDS_ID OB3472.
 
 
 0.945
OB3121
Sugar ABC transporter permease; CDS_ID OB3121.
 
 
 0.792
OB1134
Sugar ABC transporter ATP-binding protein; CDS_ID OB1134; Belongs to the ABC transporter superfamily.
 
 
 0.781
OB0775
Sugar ABC transporter permease; CDS_ID OB0775.
 
 0.774
OB0776
Sugar ABC transporter permease; CDS_ID OB0776.
 
 
 0.770
OB3422
Sugar binding-protein dependent transporter system permease; CDS_ID OB3422.
 
 
 0.755
OB2552
ABC transporter permease; CDS_ID OB2552.
 
 
 0.743
OB3423
Sugar binding-protein dependent transporter system permease; CDS_ID OB3423.
 
 0.738
OB3122
Sugar ABC transporter permease; CDS_ID OB3122.
 
 0.731
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.