rpmH protein (Oceanobacillus iheyensis) - STRING interaction network

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Score

rpmH

50S ribosomal protein L34; CDS_ID OB3496; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)

Predicted Functional Partners:

rpmB

0.987

rplU

0.986

rpsT

0.985

rpmF

0.977

rpsP

0.977

rplM

0.975

rpsU

0.975

rpmI

0.974

rpmJ

0.973

rpsO

0.973

Your Current Organism:

Oceanobacillus iheyensis

NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	gene:10732341	gene:10734292	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplM	rpmB	gene:10732341	gene:10733754	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L28; CDS_ID OB1514; Belongs to the bacterial ribosomal protein bL28 family.	0.991
rplM	rpmF	gene:10732341	gene:10733696	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L32; CDS_ID OB1456; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplM	rpmH	gene:10732341	gene:10735748	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L34; CDS_ID OB3496; Belongs to the bacterial ribosomal protein bL34 family.	0.975
rplM	rpmI	gene:10732341	gene:10734399	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L35; CDS_ID OB2151; Belongs to the bacterial ribosomal protein bL35 family.	0.992
rplM	rpmJ	gene:10732341	gene:10732332	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L36; CDS_ID OB0142; Belongs to the bacterial ribosomal protein bL36 family.	0.992
rplM	rpsO	gene:10732341	gene:10733843	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.995
rplM	rpsP	gene:10732341	gene:10733772	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S16; CDS_ID OB1532; Belongs to the bacterial ribosomal protein bS16 family.	0.994
rplM	rpsT	gene:10732341	gene:10734222	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.992
rplM	rpsU	gene:10732341	gene:10734208	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S21; CDS_ID OB1962; Belongs to the bacterial ribosomal protein bS21 family.	0.990
rplU	rplM	gene:10734292	gene:10732341	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.992
rplU	rpmB	gene:10734292	gene:10733754	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L28; CDS_ID OB1514; Belongs to the bacterial ribosomal protein bL28 family.	0.992
rplU	rpmF	gene:10734292	gene:10733696	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L32; CDS_ID OB1456; Belongs to the bacterial ribosomal protein bL32 family.	0.993
rplU	rpmH	gene:10734292	gene:10735748	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L34; CDS_ID OB3496; Belongs to the bacterial ribosomal protein bL34 family.	0.986
rplU	rpmI	gene:10734292	gene:10734399	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L35; CDS_ID OB2151; Belongs to the bacterial ribosomal protein bL35 family.	0.990
rplU	rpmJ	gene:10734292	gene:10732332	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L36; CDS_ID OB0142; Belongs to the bacterial ribosomal protein bL36 family.	0.991
rplU	rpsO	gene:10734292	gene:10733843	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.984
rplU	rpsP	gene:10734292	gene:10733772	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S16; CDS_ID OB1532; Belongs to the bacterial ribosomal protein bS16 family.	0.992
rplU	rpsT	gene:10734292	gene:10734222	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.993
rplU	rpsU	gene:10734292	gene:10734208	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S21; CDS_ID OB1962; Belongs to the bacterial ribosomal protein bS21 family.	0.990

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