STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB92645.1SusD family protein. (466 aa)    
Predicted Functional Partners:
SFB92608.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.943
SFB92687.1
Protein of unknown function.
 
     0.861
SFB92797.1
Hypothetical protein.
  
     0.774
SFB92572.1
FecR protein.
 
  
  0.688
SFD52611.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.672
SFD60969.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.669
SFB92924.1
7-keto-8-aminopelargonate synthetase.
  
     0.657
SFC41292.1
Iron complex outermembrane recepter protein.
  
 
   0.655
SFB92970.1
RteC protein.
  
     0.640
SFD60427.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.616
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.