Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC01513.1 | SFC02613.1 | SAMN04489722_101459 | SAMN04489722_101481 | Stress responsive A/B Barrel Domain. | Sortilin, neurotensin receptor 3. | 0.728 |
SFC01513.1 | SFC03262.1 | SAMN04489722_101459 | SAMN04489722_101494 | Stress responsive A/B Barrel Domain. | Glycosyl hydrolases family 16. | 0.610 |
SFC01513.1 | SFC03963.1 | SAMN04489722_101459 | SAMN04489722_101508 | Stress responsive A/B Barrel Domain. | Protein of unknown function. | 0.751 |
SFC01513.1 | SFC04694.1 | SAMN04489722_101459 | SAMN04489722_101524 | Stress responsive A/B Barrel Domain. | Starch-binding associating with outer membrane. | 0.596 |
SFC01513.1 | SFD26665.1 | SAMN04489722_101459 | SAMN04489722_106301 | Stress responsive A/B Barrel Domain. | SusD family protein. | 0.513 |
SFC02613.1 | SFC01513.1 | SAMN04489722_101481 | SAMN04489722_101459 | Sortilin, neurotensin receptor 3. | Stress responsive A/B Barrel Domain. | 0.728 |
SFC02613.1 | SFC03262.1 | SAMN04489722_101481 | SAMN04489722_101494 | Sortilin, neurotensin receptor 3. | Glycosyl hydrolases family 16. | 0.767 |
SFC02613.1 | SFC03963.1 | SAMN04489722_101481 | SAMN04489722_101508 | Sortilin, neurotensin receptor 3. | Protein of unknown function. | 0.775 |
SFC02613.1 | SFC04103.1 | SAMN04489722_101481 | SAMN04489722_101511 | Sortilin, neurotensin receptor 3. | Starch-binding associating with outer membrane. | 0.725 |
SFC02613.1 | SFC04143.1 | SAMN04489722_101481 | SAMN04489722_101512 | Sortilin, neurotensin receptor 3. | TonB-linked outer membrane protein, SusC/RagA family. | 0.665 |
SFC02613.1 | SFC04694.1 | SAMN04489722_101481 | SAMN04489722_101524 | Sortilin, neurotensin receptor 3. | Starch-binding associating with outer membrane. | 0.681 |
SFC02613.1 | SFD26665.1 | SAMN04489722_101481 | SAMN04489722_106301 | Sortilin, neurotensin receptor 3. | SusD family protein. | 0.737 |
SFC03262.1 | SFC01513.1 | SAMN04489722_101494 | SAMN04489722_101459 | Glycosyl hydrolases family 16. | Stress responsive A/B Barrel Domain. | 0.610 |
SFC03262.1 | SFC02613.1 | SAMN04489722_101494 | SAMN04489722_101481 | Glycosyl hydrolases family 16. | Sortilin, neurotensin receptor 3. | 0.767 |
SFC03262.1 | SFC03963.1 | SAMN04489722_101494 | SAMN04489722_101508 | Glycosyl hydrolases family 16. | Protein of unknown function. | 0.720 |
SFC03262.1 | SFC04103.1 | SAMN04489722_101494 | SAMN04489722_101511 | Glycosyl hydrolases family 16. | Starch-binding associating with outer membrane. | 0.758 |
SFC03262.1 | SFC04143.1 | SAMN04489722_101494 | SAMN04489722_101512 | Glycosyl hydrolases family 16. | TonB-linked outer membrane protein, SusC/RagA family. | 0.752 |
SFC03262.1 | SFC04694.1 | SAMN04489722_101494 | SAMN04489722_101524 | Glycosyl hydrolases family 16. | Starch-binding associating with outer membrane. | 0.763 |
SFC03262.1 | SFD26665.1 | SAMN04489722_101494 | SAMN04489722_106301 | Glycosyl hydrolases family 16. | SusD family protein. | 0.534 |
SFC03963.1 | SFC01513.1 | SAMN04489722_101508 | SAMN04489722_101459 | Protein of unknown function. | Stress responsive A/B Barrel Domain. | 0.751 |
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