STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC04271.1Tat (twin-arginine translocation) pathway signal sequence. (368 aa)    
Predicted Functional Partners:
SFC04360.1
Concanavalin A-like lectin/glucanases superfamily protein.
 
  0.962
SFC04307.1
Protein of unknown function.
 
     0.947
SFC04229.1
Uncharacterized membrane protein.
 
     0.938
SFB82884.1
Uncharacterized membrane protein.
  
  0.830
SFB88847.1
Copper binding protein, plastocyanin/azurin family.
  
 
 
 0.809
SFD14367.1
Azurin.
  
 
 
 0.808
SFC74376.1
Glutamate synthase (NADH) large subunit; Belongs to the glutamate synthase family.
    
  0.798
SFC68289.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
  0.749
SFC04189.1
alpha-L-fucosidase.
 
     0.748
SFD29699.1
Cytochrome c.
  
  0.740
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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