Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC08303.1 | SFC08352.1 | SAMN04489722_101596 | SAMN04489722_101597 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Inner membrane protein. | 0.498 |
SFC08352.1 | SFC08303.1 | SAMN04489722_101597 | SAMN04489722_101596 | Inner membrane protein. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.498 |
SFC08352.1 | SFC08405.1 | SAMN04489722_101597 | SAMN04489722_101598 | Inner membrane protein. | DoxX-like family protein. | 0.491 |
SFC08352.1 | SFC08457.1 | SAMN04489722_101597 | SAMN04489722_101599 | Inner membrane protein. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.491 |
SFC08352.1 | SFC08512.1 | SAMN04489722_101597 | SAMN04489722_101600 | Inner membrane protein. | DNA-binding transcriptional regulator, AcrR family. | 0.402 |
SFC08352.1 | SFC50089.1 | SAMN04489722_101597 | SAMN04489722_102563 | Inner membrane protein. | Hypothetical protein. | 0.414 |
SFC08405.1 | SFC08352.1 | SAMN04489722_101598 | SAMN04489722_101597 | DoxX-like family protein. | Inner membrane protein. | 0.491 |
SFC08405.1 | SFC08457.1 | SAMN04489722_101598 | SAMN04489722_101599 | DoxX-like family protein. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.810 |
SFC08405.1 | SFC08512.1 | SAMN04489722_101598 | SAMN04489722_101600 | DoxX-like family protein. | DNA-binding transcriptional regulator, AcrR family. | 0.732 |
SFC08457.1 | SFC08352.1 | SAMN04489722_101599 | SAMN04489722_101597 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Inner membrane protein. | 0.491 |
SFC08457.1 | SFC08405.1 | SAMN04489722_101599 | SAMN04489722_101598 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | DoxX-like family protein. | 0.810 |
SFC08457.1 | SFC08512.1 | SAMN04489722_101599 | SAMN04489722_101600 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | DNA-binding transcriptional regulator, AcrR family. | 0.792 |
SFC08512.1 | SFC08352.1 | SAMN04489722_101600 | SAMN04489722_101597 | DNA-binding transcriptional regulator, AcrR family. | Inner membrane protein. | 0.402 |
SFC08512.1 | SFC08405.1 | SAMN04489722_101600 | SAMN04489722_101598 | DNA-binding transcriptional regulator, AcrR family. | DoxX-like family protein. | 0.732 |
SFC08512.1 | SFC08457.1 | SAMN04489722_101600 | SAMN04489722_101599 | DNA-binding transcriptional regulator, AcrR family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.792 |
SFC50089.1 | SFC08352.1 | SAMN04489722_102563 | SAMN04489722_101597 | Hypothetical protein. | Inner membrane protein. | 0.414 |