STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC28241.1Nitroreductase. (210 aa)    
Predicted Functional Partners:
SFC27611.1
N-ethylmaleimide reductase.
  
 
  0.856
SFC28357.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.791
SFC28198.1
Hypothetical protein.
       0.767
SFD63726.1
Nitroreductase / dihydropteridine reductase.
  
  
 
0.767
SFC27262.1
Hypothetical protein.
  
  
 
0.765
SFB82435.1
Nitroreductase.
  
  
 
0.740
SFC28136.1
NADP-dependent alcohol dehydrogenase.
  
    0.731
SFC28092.1
Putative intracellular protease/amidase.
       0.729
SFC28298.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
    0.727
SFC28407.1
Uncharacterized membrane protein.
       0.718
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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