STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC35870.1Hypothetical protein. (352 aa)    
Predicted Functional Partners:
SFD24901.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.789
SFC64777.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.634
SFC35775.1
Sugar-transfer associated ATP-grasp.
  
    0.586
SFC35713.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.577
SFC35922.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
  
 0.576
SFC35822.1
phenylacetate-CoA ligase.
       0.558
SFC63186.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.510
SFC35965.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
 
  0.470
SFC64399.1
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing).
  
  
 0.469
SFB86103.1
methionyl-tRNA formyltransferase.
  
 
 0.444
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.