STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC45095.1Assimilatory nitrite reductase (NAD(P)H) small subunit. (125 aa)    
Predicted Functional Partners:
SFC45148.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 0.999
SFC44829.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 0.997
SFC44884.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.978
SFC44771.1
Rubredoxin.
 
 
 0.892
SFD20448.1
Glutamine synthetase.
     
 0.867
SFC77520.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
    
 0.855
SFC44995.1
Signal transduction histidine kinase.
 
     0.847
SFC02079.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 0.844
SFD05560.1
YHS domain-containing protein.
   
  0.833
SFC45041.1
Protein of unknown function.
 
     0.818
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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