Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC25929.1 | SFC63010.1 | SAMN04489722_10276 | SAMN04489722_10327 | Hypothetical protein. | Hypothetical protein. | 0.719 |
SFC25929.1 | SFC65216.1 | SAMN04489722_10276 | SAMN04489722_10374 | Hypothetical protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.531 |
SFC25929.1 | SFC67605.1 | SAMN04489722_10276 | SAMN04489722_103140 | Hypothetical protein. | Hypothetical protein. | 0.510 |
SFC25929.1 | SFC77734.1 | SAMN04489722_10276 | SAMN04489722_103409 | Hypothetical protein. | Aspartyl protease. | 0.426 |
SFC62968.1 | SFC63010.1 | SAMN04489722_10326 | SAMN04489722_10327 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.957 |
SFC62968.1 | SFC63056.1 | SAMN04489722_10326 | SAMN04489722_10328 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.773 |
SFC62968.1 | SFC63101.1 | SAMN04489722_10326 | SAMN04489722_10329 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.620 |
SFC62968.1 | SFC63140.1 | SAMN04489722_10326 | SAMN04489722_10330 | ABC-2 type transport system ATP-binding protein. | DNA-binding transcriptional regulator, PadR family. | 0.659 |
SFC62968.1 | SFC65216.1 | SAMN04489722_10326 | SAMN04489722_10374 | ABC-2 type transport system ATP-binding protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.451 |
SFC62968.1 | SFC77734.1 | SAMN04489722_10326 | SAMN04489722_103409 | ABC-2 type transport system ATP-binding protein. | Aspartyl protease. | 0.548 |
SFC62968.1 | SFD47778.1 | SAMN04489722_10326 | SAMN04489722_11089 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.438 |
SFC63010.1 | SFC25929.1 | SAMN04489722_10327 | SAMN04489722_10276 | Hypothetical protein. | Hypothetical protein. | 0.719 |
SFC63010.1 | SFC62968.1 | SAMN04489722_10327 | SAMN04489722_10326 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.957 |
SFC63010.1 | SFC63056.1 | SAMN04489722_10327 | SAMN04489722_10328 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFC63010.1 | SFC63101.1 | SAMN04489722_10327 | SAMN04489722_10329 | Hypothetical protein. | Hypothetical protein. | 0.722 |
SFC63010.1 | SFC63140.1 | SAMN04489722_10327 | SAMN04489722_10330 | Hypothetical protein. | DNA-binding transcriptional regulator, PadR family. | 0.637 |
SFC63010.1 | SFC65216.1 | SAMN04489722_10327 | SAMN04489722_10374 | Hypothetical protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.569 |
SFC63010.1 | SFC67605.1 | SAMN04489722_10327 | SAMN04489722_103140 | Hypothetical protein. | Hypothetical protein. | 0.538 |
SFC63010.1 | SFC77734.1 | SAMN04489722_10327 | SAMN04489722_103409 | Hypothetical protein. | Aspartyl protease. | 0.638 |
SFC63010.1 | SFD43719.1 | SAMN04489722_10327 | SAMN04489722_109157 | Hypothetical protein. | Hypothetical protein. | 0.499 |
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