Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC72498.1 | SFC72535.1 | SAMN04489722_103275 | SAMN04489722_103276 | OmpA family protein. | Predicted 5' DNA nuclease, flap endonuclease-1-like, helix-3-turn-helix (H3TH) domain. | 0.929 |
SFC72498.1 | SFC72612.1 | SAMN04489722_103275 | SAMN04489722_103278 | OmpA family protein. | Uncharacterized conserved protein, DUF1501 family. | 0.409 |
SFC72535.1 | SFC72498.1 | SAMN04489722_103276 | SAMN04489722_103275 | Predicted 5' DNA nuclease, flap endonuclease-1-like, helix-3-turn-helix (H3TH) domain. | OmpA family protein. | 0.929 |
SFC72535.1 | SFC72574.1 | SAMN04489722_103276 | SAMN04489722_103277 | Predicted 5' DNA nuclease, flap endonuclease-1-like, helix-3-turn-helix (H3TH) domain. | Protein of unknown function. | 0.420 |
SFC72535.1 | SFC72612.1 | SAMN04489722_103276 | SAMN04489722_103278 | Predicted 5' DNA nuclease, flap endonuclease-1-like, helix-3-turn-helix (H3TH) domain. | Uncharacterized conserved protein, DUF1501 family. | 0.420 |
SFC72574.1 | SFC72535.1 | SAMN04489722_103277 | SAMN04489722_103276 | Protein of unknown function. | Predicted 5' DNA nuclease, flap endonuclease-1-like, helix-3-turn-helix (H3TH) domain. | 0.420 |
SFC72574.1 | SFC72612.1 | SAMN04489722_103277 | SAMN04489722_103278 | Protein of unknown function. | Uncharacterized conserved protein, DUF1501 family. | 0.956 |
SFC72574.1 | SFC72656.1 | SAMN04489722_103277 | SAMN04489722_103279 | Protein of unknown function. | Hypothetical protein. | 0.524 |
SFC72612.1 | SFC72498.1 | SAMN04489722_103278 | SAMN04489722_103275 | Uncharacterized conserved protein, DUF1501 family. | OmpA family protein. | 0.409 |
SFC72612.1 | SFC72535.1 | SAMN04489722_103278 | SAMN04489722_103276 | Uncharacterized conserved protein, DUF1501 family. | Predicted 5' DNA nuclease, flap endonuclease-1-like, helix-3-turn-helix (H3TH) domain. | 0.420 |
SFC72612.1 | SFC72574.1 | SAMN04489722_103278 | SAMN04489722_103277 | Uncharacterized conserved protein, DUF1501 family. | Protein of unknown function. | 0.956 |
SFC72612.1 | SFC72656.1 | SAMN04489722_103278 | SAMN04489722_103279 | Uncharacterized conserved protein, DUF1501 family. | Hypothetical protein. | 0.524 |
SFC72656.1 | SFC72574.1 | SAMN04489722_103279 | SAMN04489722_103277 | Hypothetical protein. | Protein of unknown function. | 0.524 |
SFC72656.1 | SFC72612.1 | SAMN04489722_103279 | SAMN04489722_103278 | Hypothetical protein. | Uncharacterized conserved protein, DUF1501 family. | 0.524 |