STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC76733.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
SFC76680.1
Chloride channel protein, CIC family.
       0.774
SFC76777.1
aspartyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.634
SFD36258.1
Von Willebrand factor type A domain-containing protein.
  
     0.605
SFC95394.1
Cupredoxin-like domain-containing protein.
  
     0.551
SFC08560.1
Protein of unknown function.
 
     0.537
SFC76622.1
Chloride channel protein, CIC family.
       0.507
SFD35817.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.505
SFD10523.1
Hypothetical protein.
  
     0.471
SFC80317.1
Predicted metal-dependent phosphohydrolase, HD superfamily.
  
     0.439
SFD42893.1
4Fe-4S binding domain-containing protein.
  
     0.432
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.