STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC79610.1Cytochrome c peroxidase. (381 aa)    
Predicted Functional Partners:
SFC79751.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.833
SFC79703.1
SusD family protein.
 
     0.820
SFC79661.1
Hypothetical protein.
       0.778
SFC79802.1
Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19.
       0.773
SFC79563.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.727
SFD40306.1
WD40-like Beta Propeller Repeat.
   
   0.527
SFD72597.1
Outer membrane protein OmpA.
   
   0.527
SFB90493.1
Protein of unknown function.
   
   0.495
SFC04271.1
Tat (twin-arginine translocation) pathway signal sequence.
   
   0.495
SFC22299.1
Por secretion system C-terminal sorting domain-containing protein.
   
   0.495
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.