STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC80587.1Putative redox protein. (407 aa)    
Predicted Functional Partners:
SFD48677.1
Phospholipase/carboxylesterase.
     
 0.842
SFD63790.1
Erythromycin esterase.
   
    0.680
SFC80508.1
Predicted oxidoreductase.
       0.679
SFC80544.1
Peptide-methionine (S)-S-oxide reductase.
       0.658
SFC80465.1
Uncharacterized conserved protein YdiU, UPF0061 family.
  
    0.607
SFC26086.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
  0.567
SFD67590.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
  0.567
SFD25462.1
Glycosyltransferase involved in cell wall bisynthesis.
   
 
 0.552
SFC35300.1
Glycosyltransferase involved in cell wall bisynthesis.
   
   0.513
SFC35621.1
Glycosyltransferase involved in cell wall bisynthesis.
   
   0.513
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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