STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC80742.1Glycosyl transferase family 2. (283 aa)    
Predicted Functional Partners:
SFC80787.1
Hypothetical protein.
 
     0.845
SFC36482.1
Hypothetical protein.
  
     0.729
SFC62119.1
Tetratricopeptide repeat-containing protein.
  
   0.681
SFD42379.1
N-Dimethylarginine dimethylaminohydrolase.
  
     0.646
SFD34345.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.620
SFC80832.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
       0.610
SFD11657.1
Hypothetical protein.
 
    0.604
SFC46461.1
Tetratricopeptide repeat-containing protein.
  
   0.601
SFC63644.1
Hypothetical protein.
  
     0.589
SFD06250.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
  
  
  0.585
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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