Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC32383.1 | SFC65096.1 | SAMN04489722_102201 | SAMN04489722_10371 | Pentapeptide repeat-containing protein. | Membrane-bound lytic murein transglycosylase D. | 0.557 |
SFC32383.1 | SFC66095.1 | SAMN04489722_102201 | SAMN04489722_10397 | Pentapeptide repeat-containing protein. | Putative auto-transporter adhesin, head GIN domain. | 0.499 |
SFC32383.1 | SFC84184.1 | SAMN04489722_102201 | SAMN04489722_103559 | Pentapeptide repeat-containing protein. | Flagellum-specific peptidoglycan hydrolase FlgJ. | 0.529 |
SFC65096.1 | SFC32383.1 | SAMN04489722_10371 | SAMN04489722_102201 | Membrane-bound lytic murein transglycosylase D. | Pentapeptide repeat-containing protein. | 0.557 |
SFC65096.1 | SFC66095.1 | SAMN04489722_10371 | SAMN04489722_10397 | Membrane-bound lytic murein transglycosylase D. | Putative auto-transporter adhesin, head GIN domain. | 0.499 |
SFC65096.1 | SFC84184.1 | SAMN04489722_10371 | SAMN04489722_103559 | Membrane-bound lytic murein transglycosylase D. | Flagellum-specific peptidoglycan hydrolase FlgJ. | 0.464 |
SFC65096.1 | SFD29217.1 | SAMN04489722_10371 | SAMN04489722_10715 | Membrane-bound lytic murein transglycosylase D. | Pentapeptide repeat-containing protein. | 0.557 |
SFC66095.1 | SFC32383.1 | SAMN04489722_10397 | SAMN04489722_102201 | Putative auto-transporter adhesin, head GIN domain. | Pentapeptide repeat-containing protein. | 0.499 |
SFC66095.1 | SFC65096.1 | SAMN04489722_10397 | SAMN04489722_10371 | Putative auto-transporter adhesin, head GIN domain. | Membrane-bound lytic murein transglycosylase D. | 0.499 |
SFC66095.1 | SFC66137.1 | SAMN04489722_10397 | SAMN04489722_10398 | Putative auto-transporter adhesin, head GIN domain. | Uncharacterized conserved protein YbjQ, UPF0145 family; Belongs to the UPF0145 family. | 0.514 |
SFC66095.1 | SFC69927.1 | SAMN04489722_10397 | SAMN04489722_103205 | Putative auto-transporter adhesin, head GIN domain. | Hypothetical protein. | 0.520 |
SFC66095.1 | SFC84184.1 | SAMN04489722_10397 | SAMN04489722_103559 | Putative auto-transporter adhesin, head GIN domain. | Flagellum-specific peptidoglycan hydrolase FlgJ. | 0.499 |
SFC66095.1 | SFC92365.1 | SAMN04489722_10397 | SAMN04489722_10452 | Putative auto-transporter adhesin, head GIN domain. | Threonine/homoserine/homoserine lactone efflux protein. | 0.495 |
SFC66095.1 | SFC96019.1 | SAMN04489722_10397 | SAMN04489722_104160 | Putative auto-transporter adhesin, head GIN domain. | Protein of unknown function. | 0.536 |
SFC66095.1 | SFD05858.1 | SAMN04489722_10397 | SAMN04489722_10515 | Putative auto-transporter adhesin, head GIN domain. | Outer membrane protein beta-barrel domain-containing protein. | 0.679 |
SFC66095.1 | SFD29217.1 | SAMN04489722_10397 | SAMN04489722_10715 | Putative auto-transporter adhesin, head GIN domain. | Pentapeptide repeat-containing protein. | 0.499 |
SFC66095.1 | SFD49060.1 | SAMN04489722_10397 | SAMN04489722_110141 | Putative auto-transporter adhesin, head GIN domain. | Hypothetical protein. | 0.515 |
SFC66137.1 | SFC66095.1 | SAMN04489722_10398 | SAMN04489722_10397 | Uncharacterized conserved protein YbjQ, UPF0145 family; Belongs to the UPF0145 family. | Putative auto-transporter adhesin, head GIN domain. | 0.514 |
SFC69927.1 | SFC66095.1 | SAMN04489722_103205 | SAMN04489722_10397 | Hypothetical protein. | Putative auto-transporter adhesin, head GIN domain. | 0.520 |
SFC69927.1 | SFC92365.1 | SAMN04489722_103205 | SAMN04489722_10452 | Hypothetical protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.509 |
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