STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC97592.1Ferritin; Iron-storage protein. (172 aa)    
Predicted Functional Partners:
SFC97556.1
methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.687
SFC22608.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
  
 0.519
SFD68011.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
  
 0.519
SFC97630.1
Hypothetical protein.
       0.500
SFC77520.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
   
 
 0.481
SFD35101.1
Ferrochelatase; Belongs to the ferrochelatase family.
     
 0.469
SFC44771.1
Rubredoxin.
  
  
 0.462
SFC97512.1
Muramoyltetrapeptide carboxypeptidase.
       0.447
rpsP
SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.
   
    0.433
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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