Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC97395.1 | SFD10562.1 | SAMN04489722_104195 | SAMN04489722_105168 | DnaJ like chaperone protein. | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.523 |
SFC97395.1 | SFD10594.1 | SAMN04489722_104195 | SAMN04489722_105169 | DnaJ like chaperone protein. | STE24 endopeptidase. | 0.612 |
SFC97395.1 | ftsH | SAMN04489722_104195 | SAMN04489722_11282 | DnaJ like chaperone protein. | Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.501 |
SFC97395.1 | grpE | SAMN04489722_104195 | SAMN04489722_114116 | DnaJ like chaperone protein. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.878 |
SFD10523.1 | SFD10562.1 | SAMN04489722_105167 | SAMN04489722_105168 | Hypothetical protein. | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.558 |
SFD10523.1 | SFD10594.1 | SAMN04489722_105167 | SAMN04489722_105169 | Hypothetical protein. | STE24 endopeptidase. | 0.426 |
SFD10562.1 | SFC97395.1 | SAMN04489722_105168 | SAMN04489722_104195 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | DnaJ like chaperone protein. | 0.523 |
SFD10562.1 | SFD10523.1 | SAMN04489722_105168 | SAMN04489722_105167 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein. | 0.558 |
SFD10562.1 | SFD10594.1 | SAMN04489722_105168 | SAMN04489722_105169 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | STE24 endopeptidase. | 0.663 |
SFD10562.1 | SFD10630.1 | SAMN04489722_105168 | SAMN04489722_105170 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein. | 0.512 |
SFD10562.1 | SFD10885.1 | SAMN04489722_105168 | SAMN04489722_105179 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | DnaJ domain-containing protein. | 0.522 |
SFD10562.1 | dnaJ | SAMN04489722_105168 | SAMN04489722_114117 | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.522 |
SFD10594.1 | SFC97395.1 | SAMN04489722_105169 | SAMN04489722_104195 | STE24 endopeptidase. | DnaJ like chaperone protein. | 0.612 |
SFD10594.1 | SFD10523.1 | SAMN04489722_105169 | SAMN04489722_105167 | STE24 endopeptidase. | Hypothetical protein. | 0.426 |
SFD10594.1 | SFD10562.1 | SAMN04489722_105169 | SAMN04489722_105168 | STE24 endopeptidase. | RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.663 |
SFD10594.1 | SFD10630.1 | SAMN04489722_105169 | SAMN04489722_105170 | STE24 endopeptidase. | Hypothetical protein. | 0.683 |
SFD10594.1 | SFD10885.1 | SAMN04489722_105169 | SAMN04489722_105179 | STE24 endopeptidase. | DnaJ domain-containing protein. | 0.411 |
SFD10594.1 | SFD46281.1 | SAMN04489722_105169 | SAMN04489722_11029 | STE24 endopeptidase. | Hypothetical protein. | 0.400 |
SFD10594.1 | dnaJ | SAMN04489722_105169 | SAMN04489722_114117 | STE24 endopeptidase. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.411 |
SFD10594.1 | ftsH | SAMN04489722_105169 | SAMN04489722_11282 | STE24 endopeptidase. | Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.493 |
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