STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD06927.1Protein of unknown function. (398 aa)    
Predicted Functional Partners:
SFD06896.1
Imelysin.
 
     0.928
SFD06826.1
Fe(3+) dicitrate transport protein.
 
     0.891
SFD06864.1
Vitamin K-dependent gamma-carboxylase.
 
     0.878
SFC39361.1
Predicted lipoprotein.
 
     0.627
SFD06791.1
CarboxypepD_reg-like domain-containing protein.
 
 
   0.576
SFD43458.1
Starch-binding associating with outer membrane.
  
 
   0.533
SFD67726.1
Hypothetical protein.
  
     0.519
SFD43499.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.514
SFD29676.1
Iron complex outermembrane recepter protein.
  
 
   0.447
SFB82091.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.436
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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