STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD24870.1Protein of unknown function. (390 aa)    
Predicted Functional Partners:
SFD24842.1
Hypothetical protein.
 
     0.804
SFD08601.1
methylmalonyl-CoA mutase.
    
 0.715
trpF
Phosphoribosylanthranilate isomerase; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpF family.
   
 0.693
SFD29545.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.619
SFD64139.1
FecR protein.
  
     0.553
SFC38186.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.542
SFD24809.1
CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.538
SFD24749.1
Hypothetical protein.
  
    0.512
SFD24777.1
Membrane protein TerC, possibly involved in tellurium resistance.
       0.507
SFD21407.1
Glyoxylase, beta-lactamase superfamily II.
   
 
 0.458
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.