STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD19374.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
SFD19466.1
Sialate O-acetylesterase.
  
  0.789
SFD19300.1
Beta-glucosidase.
    
  0.752
SFD19404.1
Xylan 1,4-beta-xylosidase.
       0.752
SFD19436.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
    
  0.680
SFD19843.1
Right handed beta helix region.
  
  0.657
SFD36181.1
Hypothetical protein.
   
  0.642
SFD48881.1
Thioredoxin-like.
   
  0.642
SFB95302.1
Glycosyl hydrolases family 2, sugar binding domain.
  
 0.570
SFB95688.1
Glycosyl hydrolases family 2, sugar binding domain.
  
 0.570
SFD55216.1
Hypothetical protein.
  
 0.570
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.