STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD25202.1N-acylneuraminate cytidylyltransferase. (384 aa)    
Predicted Functional Partners:
SFD25182.1
N-acetylneuraminate synthase.
 
 0.997
SFC64446.1
N-acetylneuraminate synthase.
 
 0.992
SFD24640.1
Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
 
 0.932
SFD25161.1
Hypothetical protein.
 
     0.915
SFD61515.1
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family.
  
 0.899
SFD25107.1
Glycosyltransferase, GT2 family.
 
     0.897
SFD25275.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.867
SFC24902.1
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase).
 
  
 0.856
SFD25132.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.854
SFD25049.1
Glycosyltransferase, GT2 family.
 
     0.786
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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