STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD26557.1Protein of unknown function. (279 aa)    
Predicted Functional Partners:
SFD52151.1
Amino acid adenylation domain-containing protein.
  
  
 0.866
SFC06713.1
Endo-1,4-beta-xylanase.
 
   0.751
SFD14392.1
Hypothetical protein.
  
  
  0.731
SFD26572.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.678
SFC06943.1
Endo-1,4-beta-xylanase.
 
   0.666
SFC06985.1
Endo-1,4-beta-xylanase.
 
   0.641
SFD26592.1
Cellulase (glycosyl hydrolase family 5).
       0.600
SFD26608.1
Predicted glycosyl hydrolase, GH43/DUF377 family.
       0.600
SFD26665.1
SusD family protein.
 
     0.580
SFD52176.1
Amino acid adenylation domain-containing protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.578
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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