STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD20603.1Predicted transcriptional regulator. (119 aa)    
Predicted Functional Partners:
SFD20630.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
 
 
 0.994
SFD33980.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
 
 
 0.967
SFD33956.1
Predicted transcriptional regulator.
  
  
 
0.859
SFD40754.1
Hypothetical protein.
  
 
 0.679
SFD55626.1
Cu2+-exporting ATPase.
  
  
 0.629
SFC91195.1
Protein TonB.
 
 
 0.506
SFD20573.1
cation:H+ antiporter.
       0.500
SFD20512.1
Leucine rich repeat-containing protein.
    
  0.462
SFD20545.1
Ribosomal protein S18 acetylase RimI.
       0.460
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.