STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD28908.1Gliding motility-associated C-terminal domain-containing protein. (1499 aa)    
Predicted Functional Partners:
SFD28944.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.769
SFD28965.1
WD40-like Beta Propeller Repeat.
 
     0.748
SFD40306.1
WD40-like Beta Propeller Repeat.
  
  0.603
SFD72597.1
Outer membrane protein OmpA.
  
  0.580
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
  0.513
SFD26151.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
  0.500
SFB96436.1
Hypothetical protein.
   
  0.499
SFD34320.1
Hypothetical protein.
  
     0.490
SFC38981.1
GMP synthase (glutamine-hydrolysing).
    
  0.480
SFD65467.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.480
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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