STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD29639.1Cytochrome c. (138 aa)    
Predicted Functional Partners:
SFD26151.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
SFD29659.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
  0.969
SFC68289.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
  0.871
SFC02079.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
   
 0.816
SFD42920.1
Pyridine nucleotide-disulphide oxidoreductase.
   
 0.816
SFD29676.1
Iron complex outermembrane recepter protein.
 
     0.782
SFC77520.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
 
 
0.699
SFC38772.1
FAD/FMN-containing dehydrogenase.
 
  
 0.618
SFD29617.1
Uridine kinase.
       0.616
SFD29545.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
       0.615
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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