STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD37638.1Gliding motility-associated protein GldC. (110 aa)    
Predicted Functional Partners:
SFD37616.1
Gliding motility-associated lipoprotein GldB.
 
   
 0.871
SFC95986.1
Protein of unknown function.
  
     0.760
SFD34403.1
Hypothetical protein.
  
     0.753
SFC39717.1
Hypothetical protein.
  
     0.723
SFD11632.1
Hypothetical protein.
  
     0.692
SFD37580.1
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.646
SFD31567.1
Gliding motility-associated protein GldL.
  
   
 0.642
SFC91910.1
Cytochrome c7.
  
     0.598
SFD31614.1
Gliding motility associated protien GldN.
  
   
 0.586
SFD30333.1
Bacillithiol biosynthesis deacetylase BshB1.
  
     0.583
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.