STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD37812.1Type IX secretion system membrane protein, PorP/SprF family. (303 aa)    
Predicted Functional Partners:
SFD37837.1
Outer membrane protein OmpA.
 
     0.945
SFD37793.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.933
SFD37860.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
       0.773
SFD40306.1
WD40-like Beta Propeller Repeat.
  
     0.752
SFD28965.1
WD40-like Beta Propeller Repeat.
  
     0.750
SFD43825.1
Gliding motility-associated lipoprotein GldJ.
 
     0.721
SFC23903.1
WD40-like Beta Propeller Repeat.
  
     0.718
SFD11799.1
WD40-like Beta Propeller Repeat.
  
     0.702
SFD10201.1
Protein of unknown function.
  
     0.690
SFD72597.1
Outer membrane protein OmpA.
  
     0.685
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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