Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD25981.1 | SFD34947.1 | SAMN04489722_106267 | SAMN04489722_10847 | Magnesium chelatase subunit I. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.511 |
SFD25981.1 | SFD35101.1 | SAMN04489722_106267 | SAMN04489722_10852 | Magnesium chelatase subunit I. | Ferrochelatase; Belongs to the ferrochelatase family. | 0.873 |
SFD25981.1 | SFD35181.1 | SAMN04489722_106267 | SAMN04489722_10854 | Magnesium chelatase subunit I. | Putative membrane protein. | 0.853 |
SFD34797.1 | SFD34947.1 | SAMN04489722_10841 | SAMN04489722_10847 | Coproporphyrinogen oxidase. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.745 |
SFD34797.1 | SFD35101.1 | SAMN04489722_10841 | SAMN04489722_10852 | Coproporphyrinogen oxidase. | Ferrochelatase; Belongs to the ferrochelatase family. | 0.799 |
SFD34797.1 | SFD35181.1 | SAMN04489722_10841 | SAMN04489722_10854 | Coproporphyrinogen oxidase. | Putative membrane protein. | 0.948 |
SFD34797.1 | ctaB | SAMN04489722_10841 | SAMN04489722_10883 | Coproporphyrinogen oxidase. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.476 |
SFD34797.1 | hemE | SAMN04489722_10841 | SAMN04489722_10844 | Coproporphyrinogen oxidase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.983 |
SFD34947.1 | SFD25981.1 | SAMN04489722_10847 | SAMN04489722_106267 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Magnesium chelatase subunit I. | 0.511 |
SFD34947.1 | SFD34797.1 | SAMN04489722_10847 | SAMN04489722_10841 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Coproporphyrinogen oxidase. | 0.745 |
SFD34947.1 | SFD35002.1 | SAMN04489722_10847 | SAMN04489722_10849 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | AraC-type DNA-binding protein. | 0.508 |
SFD34947.1 | SFD35024.1 | SAMN04489722_10847 | SAMN04489722_10850 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Hypothetical protein. | 0.412 |
SFD34947.1 | SFD35052.1 | SAMN04489722_10847 | SAMN04489722_10851 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Hypothetical protein. | 0.422 |
SFD34947.1 | SFD35101.1 | SAMN04489722_10847 | SAMN04489722_10852 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Ferrochelatase; Belongs to the ferrochelatase family. | 0.834 |
SFD34947.1 | SFD35149.1 | SAMN04489722_10847 | SAMN04489722_10853 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Putative efflux protein, MATE family. | 0.476 |
SFD34947.1 | SFD35181.1 | SAMN04489722_10847 | SAMN04489722_10854 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Putative membrane protein. | 0.680 |
SFD34947.1 | ctaB | SAMN04489722_10847 | SAMN04489722_10883 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.416 |
SFD34947.1 | hemE | SAMN04489722_10847 | SAMN04489722_10844 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.997 |
SFD35002.1 | SFD34947.1 | SAMN04489722_10849 | SAMN04489722_10847 | AraC-type DNA-binding protein. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.508 |
SFD35002.1 | SFD35024.1 | SAMN04489722_10849 | SAMN04489722_10850 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.613 |
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