STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD42893.14Fe-4S binding domain-containing protein. (540 aa)    
Predicted Functional Partners:
SFD42920.1
Pyridine nucleotide-disulphide oxidoreductase.
 
     0.949
SFD42846.1
Glycosyl transferase family 2.
     0.944
SFD42820.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.928
SFD42987.1
Hypothetical protein.
 
     0.839
SFD26151.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.834
SFD42868.1
MORN repeat variant.
 
     0.815
SFC84277.1
Hypothetical protein.
 
     0.783
SFC74992.1
Hypothetical protein.
 
     0.765
SFD42943.1
Protein of unknown function, DUF547.
 
    0.760
SFD56661.1
Hypothetical protein.
 
     0.741
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.