STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD49196.1Cysteine-rich secretory protein family protein. (164 aa)    
Predicted Functional Partners:
SFC91396.1
Allosteric NADP-dependent malic enzyme.
    
  0.714
SFD65448.1
Hpt domain-containing protein.
  
     0.485
SFC93903.1
Hypothetical protein.
  
     0.471
SFD49165.1
Pyridoxamine 5'-phosphate oxidase.
       0.458
SFC74582.1
Phosphoenolpyruvate carboxylase, type 1; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
  
  
  0.435
SFC39303.1
Beta-glucosidase.
  
 
  0.431
SFC75529.1
Protein of unknown function.
  
     0.421
SFB95302.1
Glycosyl hydrolases family 2, sugar binding domain.
   
    0.414
SFB95688.1
Glycosyl hydrolases family 2, sugar binding domain.
   
    0.414
SFD55216.1
Hypothetical protein.
   
    0.414
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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