STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD49310.1Sugar (pentulose or hexulose) kinase. (456 aa)    
Predicted Functional Partners:
SFD49337.1
L-rhamnose isomerase / sugar isomerase.
 
  
 0.963
SFD49362.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
 
 0.947
SFB96712.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
 
 0.906
SFD49283.1
Purine-cytosine permease.
 
     0.895
SFB96761.1
L-rhamnose isomerase / sugar isomerase.
 
  
 0.852
SFB93798.1
Regulatory protein, gntR family.
 
 
 
 0.843
SFB96868.1
L-fuculose-phosphate aldolase.
 
 
 0.805
SFB82711.1
6-phosphogluconate dehydrogenase; Belongs to the 6-phosphogluconate dehydrogenase family.
    
 0.804
SFC41416.1
Regulatory protein, gntR family.
 
     0.765
SFB97087.1
Regulatory protein, gntR family.
 
     0.761
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.