STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD46132.1Gliding motility-associated C-terminal domain-containing protein. (906 aa)    
Predicted Functional Partners:
SFD46160.1
ABC-2 family transporter protein.
 
     0.808
SFD36241.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.716
SFD46085.1
Gliding motility-associated C-terminal domain-containing protein.
 
    
0.685
SFC82559.1
Hypothetical protein.
  
     0.659
SFC66336.1
Outer membrane protein OmpA.
  
 
   0.638
SFD46185.1
ABC-2 type transport system ATP-binding protein.
       0.635
SFD36589.1
Exosortase F-associated protein.
  
     0.626
SFB90133.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.596
SFD43848.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.592
SFD42429.1
Signal transduction histidine kinase.
  
 
   0.577
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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