STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD52964.1Hexosaminidase. (778 aa)    
Predicted Functional Partners:
SFD52916.1
Alpha-1,2-mannosidase, putative.
     0.857
SFD52771.1
Alpha-1,2-mannosidase, putative.
     0.827
SFD52943.1
N4-(beta-N-acetylglucosaminyl)-L-asparaginase.
 
   
 0.797
SFD52821.1
Beta-1,4-mannooligosaccharide/beta-1, 4-mannosyl-N-acetylglucosamine phosphorylase.
 
    0.792
SFD52987.1
Alpha-1,2-mannosidase, putative.
     0.790
SFD52878.1
Glycosyl hydrolase-like 10.
 
     0.786
SFD53299.1
Hexosaminidase.
 
  
 
0.764
SFD52849.1
Carbohydrate family 9 binding domain-like.
       0.751
SFD52798.1
Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.736
SFC39303.1
Beta-glucosidase.
    
  0.706
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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