STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD53170.1Arylsulfatase A. (533 aa)    
Predicted Functional Partners:
SFD53221.1
Arylsulfatase A.
 
    
0.677
SFD53323.1
Arylsulfatase A.
 
    
0.664
SFD53115.1
Arylsulfatase A.
 
  
 
0.591
SFD53198.1
alpha-L-fucosidase 2.
       0.566
SFD53299.1
Hexosaminidase.
  
  0.565
SFD53273.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
    
  0.564
SFD53249.1
Beta-glucosidase.
      0.541
SFB95588.1
Arylsulfatase A.
  
  
 
0.510
SFD53352.1
Alpha-1,2-mannosidase, putative.
       0.492
SFD53067.1
Arylsulfatase A.
 
    
0.450
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.