Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC04694.1 | SFC04743.1 | SAMN04489722_101524 | SAMN04489722_101525 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.935 |
SFC04694.1 | SFD60379.1 | SAMN04489722_101524 | SAMN04489722_1132 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.555 |
SFC04694.1 | SFD60403.1 | SAMN04489722_101524 | SAMN04489722_1133 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.519 |
SFC04694.1 | SFD60427.1 | SAMN04489722_101524 | SAMN04489722_1134 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.715 |
SFC04694.1 | SFD60475.1 | SAMN04489722_101524 | SAMN04489722_1136 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.650 |
SFC04743.1 | SFC04694.1 | SAMN04489722_101525 | SAMN04489722_101524 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.935 |
SFC04743.1 | SFC07137.1 | SAMN04489722_101525 | SAMN04489722_101574 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.619 |
SFC04743.1 | SFD09619.1 | SAMN04489722_101525 | SAMN04489722_105135 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.650 |
SFC04743.1 | SFD60379.1 | SAMN04489722_101525 | SAMN04489722_1132 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.509 |
SFC04743.1 | SFD60403.1 | SAMN04489722_101525 | SAMN04489722_1133 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.559 |
SFC04743.1 | SFD60449.1 | SAMN04489722_101525 | SAMN04489722_1135 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.609 |
SFC07137.1 | SFC04743.1 | SAMN04489722_101574 | SAMN04489722_101525 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.619 |
SFC07137.1 | SFD60379.1 | SAMN04489722_101574 | SAMN04489722_1132 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.538 |
SFC07137.1 | SFD60403.1 | SAMN04489722_101574 | SAMN04489722_1133 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.717 |
SFC07137.1 | SFD60427.1 | SAMN04489722_101574 | SAMN04489722_1134 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.796 |
SFC07137.1 | SFD60475.1 | SAMN04489722_101574 | SAMN04489722_1136 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.787 |
SFC07137.1 | SFD61185.1 | SAMN04489722_101574 | SAMN04489722_11335 | Starch-binding associating with outer membrane. | SusD family protein. | 0.485 |
SFD09619.1 | SFC04743.1 | SAMN04489722_105135 | SAMN04489722_101525 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.650 |
SFD09619.1 | SFD60379.1 | SAMN04489722_105135 | SAMN04489722_1132 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.461 |
SFD09619.1 | SFD60427.1 | SAMN04489722_105135 | SAMN04489722_1134 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.812 |
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