STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD62045.1Uncharacterized conserved protein YbbC, DUF1343 family. (412 aa)    
Predicted Functional Partners:
SFC39303.1
Beta-glucosidase.
 
 0.924
SFB83048.1
Transporter, SSS family.
     0.837
SFD65293.1
Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.786
SFD29115.1
D-Ala-D-Ala dipeptidase vanX. Metallo peptidase. MEROPS family M15D.
     0.737
SFD69610.1
N-acetylmuramic acid 6-phosphate etherase.
 
    0.698
SFD62076.1
Lipoprotein-releasing system permease protein.
       0.663
SFC09114.1
Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      0.615
SFC40518.1
BadF-type ATPase.
  
    0.464
SFD36792.1
Por secretion system C-terminal sorting domain-containing protein.
 
 
  0.422
Your Current Organism:
Algibacter lectus
NCBI taxonomy Id: 221126
Other names: A. lectus, Algibacter lectus Nedashkovskaya et al. 2004, Bacteroidetes bacterium KMM 3902, Bacteroidetes bacterium KMM 3914, DSM 15365, JCM 21761, KCTC 12103, KMM 3902
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