Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DL770_001174 | DL770_002378 | A0A4Q4ZX52 | A0A4Q4ZSH1 | TRASH domain-containing protein. | CP-type G domain-containing protein. | 0.993 |
DL770_001174 | DL770_003488 | A0A4Q4ZX52 | A0A4Q4ZRY0 | TRASH domain-containing protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.982 |
DL770_001174 | DL770_004754 | A0A4Q4ZX52 | A0A4Q4ZIF4 | TRASH domain-containing protein. | RNA helicase. | 0.970 |
DL770_001174 | DL770_006313 | A0A4Q4ZX52 | A0A4Q4YYI1 | TRASH domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
DL770_001174 | DL770_007186 | A0A4Q4ZX52 | A0A4Q4YPG8 | TRASH domain-containing protein. | Uncharacterized protein. | 0.994 |
DL770_001174 | DL770_010257 | A0A4Q4ZX52 | A0A4Q4XEV6 | TRASH domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.993 |
DL770_001174 | ERB1 | A0A4Q4ZX52 | A0A4Q4ZQS5 | TRASH domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
DL770_001174 | NOP7 | A0A4Q4ZX52 | A0A4V1XVV0 | TRASH domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
DL770_001174 | SPB1 | A0A4Q4ZX52 | A0A4Q4YRF4 | TRASH domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.990 |
DL770_001174 | YTM1 | A0A4Q4ZX52 | A0A4Q4Y081 | TRASH domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
DL770_002378 | DL770_001174 | A0A4Q4ZSH1 | A0A4Q4ZX52 | CP-type G domain-containing protein. | TRASH domain-containing protein. | 0.993 |
DL770_002378 | DL770_003488 | A0A4Q4ZSH1 | A0A4Q4ZRY0 | CP-type G domain-containing protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.991 |
DL770_002378 | DL770_004754 | A0A4Q4ZSH1 | A0A4Q4ZIF4 | CP-type G domain-containing protein. | RNA helicase. | 0.970 |
DL770_002378 | DL770_006313 | A0A4Q4ZSH1 | A0A4Q4YYI1 | CP-type G domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
DL770_002378 | DL770_007186 | A0A4Q4ZSH1 | A0A4Q4YPG8 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.999 |
DL770_002378 | DL770_010257 | A0A4Q4ZSH1 | A0A4Q4XEV6 | CP-type G domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.996 |
DL770_002378 | ERB1 | A0A4Q4ZSH1 | A0A4Q4ZQS5 | CP-type G domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
DL770_002378 | NOP7 | A0A4Q4ZSH1 | A0A4V1XVV0 | CP-type G domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
DL770_002378 | SPB1 | A0A4Q4ZSH1 | A0A4Q4YRF4 | CP-type G domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.992 |
DL770_002378 | YTM1 | A0A4Q4ZSH1 | A0A4Q4Y081 | CP-type G domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
page 1 of 6