STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000315565_01691Unannotated protein. (225 aa)    
Predicted Functional Partners:
GCA_000315565_05024
Unannotated protein.
  
  
 0.827
GCA_000315565_02444
Unannotated protein.
  
  
  0.744
GCA_000315565_05147
Unannotated protein.
  
  
  0.704
GCA_000315565_03228
Unannotated protein.
  
  
  0.697
GCA_000315565_04986
Unannotated protein.
     
 0.661
GCA_000315565_02131
Unannotated protein.
  
  
  0.582
GCA_000315565_02283
Unannotated protein.
     
 0.576
GCA_000315565_02130
Unannotated protein.
  
  
  0.565
GCA_000315565_01690
Unannotated protein.
 
     0.558
GCA_000315565_04280
Unannotated protein.
  
  
  0.548
Your Current Organism:
Mastigocladopsis repens
NCBI taxonomy Id: 221288
Other names: M. repens PCC 10914, Mastigocladopsis repens MORA, Mastigocladopsis repens PCC 10914, Mastigocladopsis repens str. PCC 10914, Mastigocladopsis repens strain PCC 10914
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.