STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000315565_02872Unannotated protein. (513 aa)    
Predicted Functional Partners:
GCA_000315565_00857
Unannotated protein.
   
 0.837
GCA_000315565_03647
Unannotated protein.
  
  0.815
GCA_000315565_01613
Unannotated protein.
  
  0.809
GCA_000315565_03978
Unannotated protein.
  
  0.803
GCA_000315565_02272
Unannotated protein.
   
 0.768
GCA_000315565_03577
Unannotated protein.
  
  0.764
GCA_000315565_05805
Unannotated protein.
  
  
 
0.733
GCA_000315565_00349
Unannotated protein.
  
  
 0.727
GCA_000315565_03285
Unannotated protein.
    
 0.718
GCA_000315565_03114
Unannotated protein.
  
  
 
0.711
Your Current Organism:
Mastigocladopsis repens
NCBI taxonomy Id: 221288
Other names: M. repens PCC 10914, Mastigocladopsis repens MORA, Mastigocladopsis repens PCC 10914, Mastigocladopsis repens str. PCC 10914, Mastigocladopsis repens strain PCC 10914
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.