STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000315565_04081Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_000315565_05273
Unannotated protein.
    
 
 0.825
GCA_000315565_00289
Unannotated protein.
    
  0.763
GCA_000315565_01122
Unannotated protein.
    
  0.763
GCA_000315565_01337
Unannotated protein.
    
  0.763
GCA_000315565_01957
Unannotated protein.
    
  0.763
GCA_000315565_02303
Unannotated protein.
    
  0.763
GCA_000315565_02579
Unannotated protein.
    
  0.763
GCA_000315565_02580
Unannotated protein.
    
  0.763
GCA_000315565_02689
Unannotated protein.
    
  0.763
GCA_000315565_03277
Unannotated protein.
    
  0.763
Your Current Organism:
Mastigocladopsis repens
NCBI taxonomy Id: 221288
Other names: M. repens PCC 10914, Mastigocladopsis repens MORA, Mastigocladopsis repens PCC 10914, Mastigocladopsis repens str. PCC 10914, Mastigocladopsis repens strain PCC 10914
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.