STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000315565_05708Unannotated protein. (207 aa)    
Predicted Functional Partners:
GCA_000315565_03043
Unannotated protein.
 
 0.987
GCA_000315565_01911
Unannotated protein.
 
  
 0.851
GCA_000315565_03946
Unannotated protein.
    
 0.749
GCA_000315565_05267
Unannotated protein.
    
 0.749
GCA_000315565_05730
Unannotated protein.
    
 0.729
GCA_000315565_03862
Unannotated protein.
    
 0.718
GCA_000315565_01019
Unannotated protein.
 
   
 0.677
GCA_000315565_05709
Unannotated protein.
       0.611
GCA_000315565_05707
Unannotated protein.
       0.523
GCA_000315565_05379
Unannotated protein.
    
 0.519
Your Current Organism:
Mastigocladopsis repens
NCBI taxonomy Id: 221288
Other names: M. repens PCC 10914, Mastigocladopsis repens MORA, Mastigocladopsis repens PCC 10914, Mastigocladopsis repens str. PCC 10914, Mastigocladopsis repens strain PCC 10914
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.